ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rwwB1 - ECOD Domain | ECOD

ECOD/Domains/e4rwwB1

e4rwwB1

UID: 001481300

PDB

Range: B:1-112
PDB: 4RWW chain B(all domains)
UniProt: Q8Y3Y7 (all domains)
Gene: lmo2692

Molecule: Lmo2692 protein

3D Structure

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Related Domains

Browse other domains in CdAMP_rec →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupGlnB-like(304.5)

TT-groupGlnB-like(304.5.1)

FFamilyCdAMP_rec(304.5.1.4)

Ligands

in contact, ≤ 4 Å

(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide2BA

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF06153CdAMP_rec

Cyclic-di-AMP receptor

ClanCL0089GlnB-like

External Links

ECOD PDB View: 4RWW RCSB PDB: 4RWW PDBe: 4RWW UniProt: Q8Y3Y7

Downloads

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