ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rcfA2 - ECOD Domain | ECOD

ECOD/Domains/e4rcfA2

e4rcfA2

UID: 001481921

PDB

Range: A:-1-183
PDB: 4RCF chain A(all domains)
UniProt: P56817 (all domains)
Gene: BACE1

Molecule: Beta-secretase 1

3D Structure

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Related Domains

Browse other domains in Asp →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyAsp(1.1.1.1)

Ligands

in contact, ≤ 4 Å

(4S)-2'-(3,6-dihydro-2H-pyran-4-yl)-4'-fluoro-7'-(2-fluoropyridin-3-yl)spiro[1,3-oxazole-4,9'-xanthen]-2-amine3LO
Iodide ionIOD

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

Eukaryotic aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 4RCF RCSB PDB: 4RCF PDBe: 4RCF UniProt: P56817

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.