ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4ddgB1 - ECOD Domain | ECOD

ECOD/Domains/e4ddgB1

e4ddgB1

UID: 000148259

PDB

Range: B:1030-1271
PDB: 4DDG chain B(all domains)
UniProt: P62837 (all domains)
Gene: UBE2D2

Molecule: Ubiquitin-conjugating enzyme E2 D2, Ubiquitin thioesterase OTUB1

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_C65 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C65(219.1.1.48)

Pfam Families

PF10275Peptidase_C65

Peptidase C65 Otubain

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 4DDG RCSB PDB: 4DDG PDBe: 4DDG UniProt: P62837

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure