ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4wj4A2 - ECOD Domain | ECOD

ECOD/Domains/e4wj4A2

e4wj4A2

UID: 001482646

PDB

Range: A:111-290,A:424-586
PDB: 4WJ4 chain A(all domains)
UniProt: Q51422 (all domains)
Gene: aspS

Molecule: Aspartate--tRNA(Asp/Asn) ligase

3D Structure

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Related Domains

Browse other domains in tRNA-synt_2 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilytRNA-synt_2(314.1.1.1)

Ligands

in contact, ≤ 4 Å

Aspartic acidASP
drugDrugBank DB00128

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00152tRNA-synt_2

tRNA synthetases class II (D, K and N)

ClanCL0040tRNA_synt_II

External Links

ECOD PDB View: 4WJ4 RCSB PDB: 4WJ4 PDBe: 4WJ4 UniProt: Q51422

Downloads

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