ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3vkxA2 - ECOD Domain | ECOD

ECOD/Domains/e3vkxA2

e3vkxA2

UID: 000148654

PDB

Range: A:127-255
PDB: 3VKX chain A(all domains)
UniProt: P12004 (all domains)
Gene: PCNA

Molecule: Proliferating cell nuclear antigen

3D Structure

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Related Domains

Browse other domains in PCNA_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDNA clamp(227)

HH-groupDNA clamp(227.1)

TT-groupDNA clamp(227.1.1)

FFamilyPCNA_C(227.1.1.6)

Ligands

in contact, ≤ 4 Å

LiothyronineT3
drugDrugBank DB00279
Chloride ionCL

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Pfam Families

Proliferating cell nuclear antigen, C-terminal domain

ClanCL0060DNA_clamp

External Links

ECOD PDB View: 3VKX RCSB PDB: 3VKX PDBe: 3VKX UniProt: P12004

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.