ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vfqA2 - ECOD Domain | ECOD

ECOD/Domains/e2vfqA2

e2vfqA2

UID: 001488096

PDB

Range: A:111-546
PDB: 2VFQ chain A(all domains)
UniProt: P12528 (all domains)
Gene: 9

Molecule: P22 TAILSPIKE PROTEIN,

3D Structure

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Related Domains

Browse other domains in PhageP22-tail →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyPhageP22-tail(207.2.1.16)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09251PhageP22-tail

Salmonella phage P22 tail-spike

ClanCL0268Pec_lyase-like

External Links

ECOD PDB View: 2VFQ RCSB PDB: 2VFQ PDBe: 2VFQ UniProt: P12528

Downloads

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