ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4nniB1 - ECOD Domain | ECOD

ECOD/Domains/e4nniB1

e4nniB1

UID: 001488615

PDB

Range: B:285-438
PDB: 4NNI chain B(all domains)
UniProt: P9WH43 (all domains)
Gene: rpsA

Molecule: 30S ribosomal protein S1

3D Structure

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Related Domains

Browse other domains in S1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyS1(2.1.1.7)

Ligands

in contact, ≤ 4 Å

PYRAZINE-2-CARBOXYLIC ACIDVGL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

S1 RNA binding domain

ClanCL0021OB

External Links

ECOD PDB View: 4NNI RCSB PDB: 4NNI PDBe: 4NNI UniProt: P9WH43

Downloads

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