ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4d6tO2 - ECOD Domain | ECOD

ECOD/Domains/e4d6tO2

e4d6tO2

UID: 001488746

PDB

Range: O:21-235
PDB: 4D6T chain O(all domains)
UniProt: P23004 (all domains)
Gene: UQCRC2

Molecule: CYTOCHROME B-C1 COMPLEX SUBUNIT 2, MITOCHONDRIAL

3D Structure

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Related Domains

Browse other domains in Peptidase_M16 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupLuxS, MPP, ThrRS/AlaRS common domain(309)

HH-groupLuxS, MPP, ThrRS/AlaRS common domain(309.1)

TT-groupLuxS/MPP-like metallohydrolase(309.1.1)

FFamilyPeptidase_M16(309.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00675Peptidase_M16

Insulinase (Peptidase family M16)

ClanCL0094Peptidase_ME

External Links

ECOD PDB View: 4D6T RCSB PDB: 4D6T PDBe: 4D6T UniProt: P23004

Downloads

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