ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4oecD1 - ECOD Domain | ECOD

ECOD/Domains/e4oecD1

e4oecD1

UID: 001489115

PDB

Range: D:1-248
PDB: 4OEC chain D(all domains)
UniProt: Q5JGZ3 (all domains)
Gene: TK1397

Molecule: Glycerophosphoryl diester phosphodiesterase

3D Structure

Loading viewer...

Related Domains

Browse other domains in GDPD →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGDPD(2002.1.1.106)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Glycerophosphoryl diester phosphodiesterase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4OEC RCSB PDB: 4OEC PDBe: 4OEC UniProt: Q5JGZ3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure