ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4onvD1 - ECOD Domain | ECOD

ECOD/Domains/e4onvD1

e4onvD1

UID: 001489132

PDB

Range: D:12-309
PDB: 4ONV chain D(all domains)
UniProt: P75682 (all domains)
Gene: yagE

Molecule: Probable 2-keto-3-deoxy-galactonate aldolase YagE

3D Structure

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Related Domains

Browse other domains in DHDPS →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDHDPS(2002.1.1.29)

Ligands

in contact, ≤ 4 Å

2-Keto-3-DeoxygluconateKDG
drugDrugBank DB03489

+ 2 additives (Glycerin, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462

Pfam Families

Dihydrodipicolinate synthetase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4ONV RCSB PDB: 4ONV PDBe: 4ONV UniProt: P75682

Downloads

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1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.