ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4uziB2 - ECOD Domain | ECOD

ECOD/Domains/e4uziB2

e4uziB2

UID: 001489331

PDB

Range: B:3-157
PDB: 4UZI chain B(all domains)
UniProt: I2DBY1 (all domains)
Gene: dyp1

Molecule: DYE-DECOLORIZING PEROXIDASE

3D Structure

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Related Domains

Browse other domains in DyP_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupDimeric alpha+beta barrel(304.4)

TT-groupDimeric alpha+beta barrel(304.4.1)

FFamilyDyP_N(304.4.1.24)

Ligands

in contact, ≤ 4 Å

Glycolic acidGOA
drugDrugBank DB03085within 5 Å only
Potassium ionK
metal

+ 3 additives (HEPES, Imidazole, (4r)-2-Methylpentane-2,4-Diol)

Pfam Families

DyP dimeric alpha+beta barrel domain

ClanCL0032Dim_A_B_barrel

External Links

ECOD PDB View: 4UZI RCSB PDB: 4UZI PDBe: 4UZI UniProt: I2DBY1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

HEPESEPE

DrugBank DB16872

ImidazoleIMD

DrugBank DB03366

(4r)-2-Methylpentane-2,4-DiolMPD

DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.