ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1irxA4 - ECOD Domain | ECOD

ECOD/Domains/e1irxA4

e1irxA4

UID: 001489659

RepresentativePDB

Range: A:169-216
PDB: 1IRX chain A(all domains)
UniProt: O57963 (all domains)
Gene: lysS

Molecule: lysyl-tRNA synthetase

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1f →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilytRNA-synt_1f(375.1.1.17)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01921tRNA-synt_1f

tRNA synthetases class I (K)

ClanCL0039HUP

External Links

ECOD PDB View: 1IRX RCSB PDB: 1IRX PDBe: 1IRX UniProt: O57963

Downloads

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