ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4c5cB2 - ECOD Domain | ECOD

ECOD/Domains/e4c5cB2

e4c5cB2

UID: 001489735

PDB

Range: B:1-96
PDB: 4C5C chain B(all domains)
UniProt: C4ZRI7 (all domains)

Molecule: D-ALANINE--D-ALANINE LIGASE

3D Structure

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Related Domains

Browse other domains in Dala_Dala_lig_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupPreATP-grasp domain(2003.1.10)

FFamilyDala_Dala_lig_N(2003.1.10.2)

Ligands

in contact, ≤ 4 Å

D-AlanineDAL
drugDrugBank DB01786
ATPATP
drugDrugBank DB00171within 5 Å only

Shown in the structure viewer.

Pfam Families

PF01820Dala_Dala_lig_N

D-ala D-ala ligase N-terminus

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4C5C RCSB PDB: 4C5C PDBe: 4C5C UniProt: C4ZRI7

Downloads

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Drug annotations from DrugDomain.