ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qd4B1 - ECOD Domain | ECOD

ECOD/Domains/e4qd4B1

e4qd4B1

UID: 001489946

PDB

Range: B:5-62,B:228-361
PDB: 4QD4 chain B(all domains)
UniProt: R4NH29 (all domains)
Gene: blaADC-68

Molecule: Beta-lactamase ADC-68

3D Structure

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Related Domains

Browse other domains in Beta-lactamase →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3)

TT-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3.1)

FFamilyBeta-lactamase(223.3.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Citric acid, 2-(N-morpholino)ethanesulfonic acid)

Citric acidCIT
DrugBank DB04272
2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814

Shown in the structure viewer.

Pfam Families

PF00144Beta-lactamase

Beta-lactamase

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 4QD4 RCSB PDB: 4QD4 PDBe: 4QD4 UniProt: R4NH29

Downloads

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Drug annotations from DrugDomain.