ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4xi1B1 - ECOD Domain | ECOD

ECOD/Domains/e4xi1B1

e4xi1B1

UID: 001490346

PDB

Range: B:124-198
PDB: 4XI1 chain B(all domains)
UniProt: Q5X159 (all domains)
Gene: lubX

Molecule: E3 ubiquitin-protein ligase LubX

3D Structure

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Related Domains

Browse other domains in U-box →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyU-box(376.1.1.8)

Ligands

in contact, ≤ 4 Å

Hexane-1,6-DiolHEZ
drugDrugBank DB02210
Chloride ionCL

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

U-box domain

ClanCL0229RING

External Links

ECOD PDB View: 4XI1 RCSB PDB: 4XI1 PDBe: 4XI1 UniProt: Q5X159

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.