ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3avsA1 - ECOD Domain | ECOD

ECOD/Domains/e3avsA1

e3avsA1

UID: 001491038

PDB

Range: A:922-1047,A:1081-1243
PDB: 3AVS chain A(all domains)
UniProt: O15550 (all domains)
Gene: KDM6A

Molecule: Lysine-specific demethylase 6A

3D Structure

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Related Domains

Browse other domains in JmjC →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyJmjC(10.12.1.9)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
NICKEL (II) IONNI
metal
N-oxalylglycineOGA

Pfam Families

JmjC domain, hydroxylase

ClanCL0029Cupin

External Links

ECOD PDB View: 3AVS RCSB PDB: 3AVS PDBe: 3AVS UniProt: O15550

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.