ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4xd1A1 - ECOD Domain | ECOD

ECOD/Domains/e4xd1A1

e4xd1A1

UID: 001491747

PDB

Range: A:193-270
PDB: 4XD1 chain A(all domains)
UniProt: F8RC03 (all domains)
Gene: qdtf

Molecule: TDP-3-aminoquinovose-N-formyltransferase

3D Structure

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Related Domains

Browse other domains in Formyl_trans_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupFMT C-terminal domain-like(270)

HH-groupFMT C-terminal domain-related(270.1)

TT-groupFMT C-terminal domain-related(270.1.1)

FFamilyFormyl_trans_C(270.1.1.2)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
[(3R,4S,5S,6R)-4-amino-3,5-dihydroxy-6-methyloxan-2-yl][hydroxy-[[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl] hydrogen phosphateT3Q

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

PF02911Formyl_trans_C

Formyl transferase, C-terminal domain

External Links

ECOD PDB View: 4XD1 RCSB PDB: 4XD1 PDBe: 4XD1 UniProt: F8RC03

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.