ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4opbA1 - ECOD Domain | ECOD

ECOD/Domains/e4opbA1

e4opbA1

UID: 001491982

PDB

Range: A:1-233
PDB: 4OPB chain A(all domains)
UniProt: Q2U8Y3 (all domains)
Gene: AA13

Molecule: Predicted protein

3D Structure

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Related Domains

Browse other domains in LPMO_10 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyLPMO_10(11.1.1.49)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
COPPER (II) IONCU
metal
Zinc ion

Pfam Families

PF03067LPMO_10

Lytic polysaccharide mono-oxygenase, cellulose-degrading

ClanCL0159E-set

External Links

ECOD PDB View: 4OPB RCSB PDB: 4OPB PDBe: 4OPB UniProt: Q2U8Y3

Downloads

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metal

+ 3 additives (Acetate, Glycerin, Isopropyl alcohol)

AcetateACT
DrugBank DB14511
GlycerinGOL
DrugBank DB09462
Isopropyl alcoholIPA
DrugBank DB02325

Shown in the structure viewer. Drug annotations from DrugDomain.