ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4re5A1 - ECOD Domain | ECOD

ECOD/Domains/e4re5A1

e4re5A1

UID: 001492135

PDB

Range: A:8-321
PDB: 4RE5 chain A(all domains)
UniProt: Q9YBQ2 (all domains)
Gene: APE_1547.1

Molecule: Acylamino-acid-releasing enzyme

3D Structure

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Related Domains

Browse other domains in APH-like_N →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyAPH-like_N(5.1.4.65)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
within 5 Å only

+ 2 additives (Acetate, (4r)-2-Methylpentane-2,4-Diol)

AcetateACT
DrugBank DB14511
(4r)-2-Methylpentane-2,4-Diol

Pfam Families

PF22173APH-like_N

Acylamino-acid-releasing enzyme-like, N-terminal domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 4RE5 RCSB PDB: 4RE5 PDBe: 4RE5 UniProt: Q9YBQ2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03564within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.