ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ebjA1 - ECOD Domain | ECOD

ECOD/Domains/e4ebjA1

e4ebjA1

UID: 000149236

PDB

Range: A:2-134
PDB: 4EBJ chain A(all domains)
UniProt: D0E7M2 (all domains)
Gene: ant(4')-IIb

Molecule: Aminoglycoside nucleotidyltransferase

3D Structure

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Related Domains

Browse other domains in NTP_transf_2 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyNTP_transf_2(316.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01909NTP_transf_2

Nucleotidyltransferase domain

ClanCL0260NTP_transf

External Links

ECOD PDB View: 4EBJ RCSB PDB: 4EBJ PDBe: 4EBJ UniProt: D0E7M2

Downloads

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