ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4om8A1 - ECOD Domain | ECOD

ECOD/Domains/e4om8A1

e4om8A1

UID: 001495175

RepresentativePDB

Range: A:1-181
PDB: 4OM8 chain A(all domains)
UniProt: Q988C8 (all domains)
Gene: fhmpcd1

Molecule: 5-formyl-3-hydroxy-2-methylpyridine 4-carboxylate 5-dehydrogenase

3D Structure

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Related Domains

Browse other domains in 3HCDH_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamily3HCDH_N(2003.1.1.36)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128

+ 2 additives (Glycerin, Acetate ion)

GlycerinGOL
DrugBank DB09462within 5 Å only

Pfam Families

PF027373HCDH_N

3-hydroxyacyl-CoA dehydrogenase, NAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4OM8 RCSB PDB: 4OM8 PDBe: 4OM8 UniProt: Q988C8

Downloads

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Acetate ionACT

Shown in the structure viewer. Drug annotations from DrugDomain.