ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3secA1 - ECOD Domain | ECOD

ECOD/Domains/e3secA1

e3secA1

UID: 000149532

PDB

Range: A:4-224
PDB: 3SEC chain A(all domains)
UniProt: O26232 (all domains)
Gene: pyrF

Molecule: Orotidine 5'-phosphate decarboxylase

3D Structure

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Related Domains

Browse other domains in OMPdecase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyOMPdecase(2002.1.1.9)

Ligands

in contact, ≤ 4 Å

(1S)-1,4-anhydro-1-(5-carbamoyl-4-hydroxy-1H-pyrazol-3-yl)-5-O-phosphono-D-ribitolPFU

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00215OMPdecase

Orotidine 5'-phosphate decarboxylase / HUMPS family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3SEC RCSB PDB: 3SEC PDBe: 3SEC UniProt: O26232

Downloads

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