ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qvmN1 - ECOD Domain | ECOD

ECOD/Domains/e4qvmN1

e4qvmN1

UID: 001496584

PDB

Range: N:1-196
PDB: 4QVM chain N(all domains)
UniProt: P38624 (all domains)
Gene: PRE3

Molecule: Proteasome subunit beta type-1

3D Structure

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Related Domains

Browse other domains in Proteasome →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupProteasome subunits(210.1.1)

FFamilyProteasome(210.1.1.1)

Ligands

in contact, ≤ 4 Å

BortezomibBO2
drugDrugBank DB00188
Chloride ionCL
Magnesium ionMG

Pfam Families

PF00227Proteasome

Proteasome subunit

ClanCL0052NTN

External Links

ECOD PDB View: 4QVM RCSB PDB: 4QVM PDBe: 4QVM UniProt: P38624

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.