ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qwsH1 - ECOD Domain | ECOD

ECOD/Domains/e4qwsH1

e4qwsH1

UID: 001497160

PDB

Range: H:1-222
PDB: 4QWS chain H(all domains)
UniProt: P25043 (all domains)
Gene: PUP1

Molecule: Proteasome subunit beta type-2

3D Structure

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Related Domains

Browse other domains in Proteasome,Pr_beta_C →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupProteasome subunits(210.1.1)

FFamilyProteasome,Pr_beta_C(210.1.1.3)

Ligands

in contact, ≤ 4 Å

N-{(2S)-2-[(morpholin-4-ylacetyl)amino]-4-phenylbutanoyl}-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-phenylalaninamide3BV
Chloride ionCL

+ 1 additive (2-(N-morpholino)ethanesulfonic acid)

2-(N-morpholino)ethanesulfonic acid

Pfam Families

PF00227Proteasome

Proteasome subunit

ClanCL0052NTN

PF12465Pr_beta_C

Proteasome beta subunits C terminal

External Links

ECOD PDB View: 4QWS RCSB PDB: 4QWS PDBe: 4QWS UniProt: P25043

Downloads

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DrugBank DB03814

Shown in the structure viewer. Drug annotations from DrugDomain.