ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4cjnA3 - ECOD Domain | ECOD

ECOD/Domains/e4cjnA3

e4cjnA3

UID: 001497978

PDB

Range: A:139-167,A:239-326
PDB: 4CJN chain A(all domains)
UniProt: Q54113 (all domains)

Molecule: PENICILLIN BINDING PROTEIN 2 PRIME

3D Structure

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Related Domains

Browse other domains in PBP_dimer →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupPenicillin binding protein dimerisation domain(3702)

HH-groupPenicillin binding protein dimerisation domain(3702.1)

TT-groupPenicillin binding protein dimerisation domain(3702.1.1)

FFamilyPBP_dimer(3702.1.1.1)

Ligands

in contact, ≤ 4 Å

Cadmium ionCD
metal
Chloride ionCL
beta-muramic acidMUR

Pfam Families

PF03717PBP_dimer

Penicillin-binding Protein dimerisation domain

ClanCL0776PBP_NTD

External Links

ECOD PDB View: 4CJN RCSB PDB: 4CJN PDBe: 4CJN UniProt: Q54113

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(E)-3-(2-(4-cyanostyryl)-4-oxoquinazolin-3(4H)-yl)benzoic acidQNZ

Shown in the structure viewer. Drug annotations from DrugDomain.