ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rynA1 - ECOD Domain | ECOD

ECOD/Domains/e4rynA1

e4rynA1

UID: 001498055

PDB

Range: A:1-153
PDB: 4RYN chain A(all domains)
UniProt: Q81BL7 (all domains)
Gene: tspO

Molecule: Integral membrane protein

3D Structure

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Related Domains

Browse other domains in TspO_MBR →

Classification

AArchitecturealpha bundles(a.7)

XX-groupMitochondrial translocator protein (TSPO)(3861)

HH-groupMitochondrial translocator protein (TSPO)(3861.1)

TT-groupMitochondrial translocator protein (TSPO)(3861.1.1)

FFamilyTspO_MBR(3861.1.1.1)

Ligands

in contact, ≤ 4 Å

Dodecyl-Alpha-D-MaltosideLMU
drugDrugBank DB03279
[(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoateMPG
drugDrugBank DB03831

Pfam Families

PF03073TspO_MBR

TspO/MBR family

ClanCL0976TSPO

External Links

ECOD PDB View: 4RYN RCSB PDB: 4RYN PDBe: 4RYN UniProt: Q81BL7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Triethylene glycol, Cacodylate ion)

Triethylene glycolPGE
DrugBank DB02327
Cacodylate ionCAC

Shown in the structure viewer. Drug annotations from DrugDomain.