ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3p5pA3 - ECOD Domain | ECOD

ECOD/Domains/e3p5pA3

e3p5pA3

UID: 001498233

RepresentativePDB

Range: A:538-862
PDB: 3P5P chain A(all domains)
UniProt: Q41594 (all domains)
Gene: TDC1

Molecule: Taxadiene synthase

3D Structure

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Related Domains

Browse other domains in Terpene_synth_C →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilyTerpene_synth_C(141.1.1.4)

Ligands

in contact, ≤ 4 Å

2-(methyl{2-[(1S,4aS,8aS)-5,5,8a-trimethyl-2-methylidenedecahydronaphthalen-1-yl]ethyl}amino)ethyl trihydrogen diphosphateA3C
Magnesium ionMG
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer.

Pfam Families

PF03936Terpene_synth_C

Terpene synthase family, metal binding domain

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 3P5P RCSB PDB: 3P5P PDBe: 3P5P UniProt: Q41594

Downloads

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Drug annotations from DrugDomain.