ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4wfqA1 - ECOD Domain | ECOD

ECOD/Domains/e4wfqA1

e4wfqA1

UID: 001498349

RepresentativePDB

Range: A:119-310
PDB: 4WFQ chain A(all domains)
UniProt: Q04673 (all domains)
Gene: SSL1

Molecule: Suppressor of stem-loop protein 1

3D Structure

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Related Domains

Browse other domains in Ssl1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupvWA-like(2006.1.6)

FFamilySsl1(2006.1.6.6)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546within 5 Å only

Shown in the structure viewer.

Pfam Families

Ssl1-like

ClanCL0128vWA-like

External Links

ECOD PDB View: 4WFQ RCSB PDB: 4WFQ PDBe: 4WFQ UniProt: Q04673

Downloads

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Drug annotations from DrugDomain.