ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4b9yA3 - ECOD Domain | ECOD

ECOD/Domains/e4b9yA3

e4b9yA3

UID: 001498680

PDB

Range: A:669-817
PDB: 4B9Y chain A(all domains)
UniProt: B3PEE6 (all domains)
Gene: agd31B

Molecule: ALPHA-GLUCOSIDASE, PUTATIVE, ADG31B

3D Structure

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Related Domains

Browse other domains in DUF5110 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupPutative glucosidase YicI, C-terminal domain(4178)

HH-groupPutative glucosidase YicI, C-terminal domain(4178.1)

TT-groupPutative glucosidase YicI, C-terminal domain(4178.1.1)

FFamilyDUF5110(4178.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 4 additives (Sulfate ion, 1,2-ETHANEDIOL, Oxalate ion, …)

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOLEDO
Oxalate ionOXL

Pfam Families

PF17137DUF5110

Domain of unknown function (DUF5110)

External Links

ECOD PDB View: 4B9Y RCSB PDB: 4B9Y PDBe: 4B9Y UniProt: B3PEE6

Downloads

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Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.