ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ielA2 - ECOD Domain | ECOD

ECOD/Domains/e3ielA2

e3ielA2

UID: 001499085

PDB

Range: A:1-194,A:379-431
PDB: 3IEL chain A(all domains)
UniProt: Q5SLP1 (all domains)
Gene: TTHA0252

Molecule: Ribonuclease TTHA0252

3D Structure

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Related Domains

Browse other domains in Lactamase_B,RMMBL →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyLactamase_B,RMMBL(247.1.1.2)

Ligands

in contact, ≤ 4 Å

Uridine monophosphateU5P
drugDrugBank DB03685
Zinc ionZN
metal

+ 2 additives (Sulfate ion, Citrate anion)

Pfam Families

PF00753Lactamase_B

Metallo-beta-lactamase superfamily

ClanCL0381Metallo-HOrase

Zn-dependent metallo-hydrolase RNA specificity domain

ClanCL0398RMMBL_DRMBL

External Links

ECOD PDB View: 3IEL RCSB PDB: 3IEL PDBe: 3IEL UniProt: Q5SLP1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Citrate anionFLC

Shown in the structure viewer. Drug annotations from DrugDomain.