ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ygtA1 - ECOD Domain | ECOD

ECOD/Domains/e2ygtA1

e2ygtA1

UID: 000149937

PDB

Range: A:9-290
PDB: 2YGT chain A(all domains)
UniProt: B8QGZ7 (all domains)

Molecule: DELTA TOXIN

3D Structure

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Related Domains

Browse other domains in Leukocidin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupLeukocidin-like(11.13)

TT-groupLeukocidin-like(11.13.1)

FFamilyLeukocidin(11.13.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 2 additives (Glycerin, Imidazole)

GlycerinGOL
DrugBank DB09462
Imidazole

Pfam Families

PF07968Leukocidin

Leukocidin/Hemolysin toxin family

ClanCL0636Leukocidin

External Links

ECOD PDB View: 2YGT RCSB PDB: 2YGT PDBe: 2YGT UniProt: B8QGZ7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.