ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3tjoA1 - ECOD Domain | ECOD

ECOD/Domains/e3tjoA1

e3tjoA1

UID: 000149961

PDB

Range: A:161-370
PDB: 3TJO chain A(all domains)
UniProt: Q92743 (all domains)
Gene: HTRA1

Molecule: Serine protease HTRA1

3D Structure

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Related Domains

Browse other domains in Trypsin_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin_2(1.1.17.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, Sulfate ion, octyl beta-D-glucopyranoside)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546
octyl beta-D-glucopyranoside

Pfam Families

PF13365Trypsin_2

Trypsin-like peptidase domain

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 3TJO RCSB PDB: 3TJO PDBe: 3TJO UniProt: Q92743

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.