ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ktrD2 - ECOD Domain | ECOD

ECOD/Domains/e4ktrD2

e4ktrD2

UID: 001499875

PDB

Range: D:249-686
PDB: 4KTR chain D(all domains)
UniProt: D6XZ22 (all domains)
Gene: Bsel_2816

Molecule: Glycoside hydrolase family 65 central catalytic

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_65m →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyGlyco_hydro_65m(109.2.1.12)

Ligands

in contact, ≤ 4 Å

AfegostatIFM
drugDrugBank DB04545
2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL7PE
Calcium ionCA

Pfam Families

PF03632Glyco_hydro_65m

Glycosyl hydrolase family 65 central catalytic domain

ClanCL00596_Hairpin

External Links

ECOD PDB View: 4KTR RCSB PDB: 4KTR PDBe: 4KTR UniProt: D6XZ22

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 2 additives (Glycerin, Tetraethylene glycol)

GlycerinGOL
DrugBank DB09462
Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.