ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4wt9A2 - ECOD Domain | ECOD

ECOD/Domains/e4wt9A2

e4wt9A2

UID: 001500517

PDB

Range: A:1-356
PDB: 4WT9 chain A(all domains)
UniProt: Q99IB8 (all domains)

Molecule: RNA-directed RNA polymerase

3D Structure

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Related Domains

Browse other domains in RdRP_3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRdRP_3(304.48.1.15)

Ligands

in contact, ≤ 4 Å

PentaglymePG6
drugDrugBank DB02580

+ 1 additive (HEPES)

HEPESEPE
DrugBank DB16872

Shown in the structure viewer.

Pfam Families

Viral RNA dependent RNA polymerase

ClanCL0027RdRP

External Links

ECOD PDB View: 4WT9 RCSB PDB: 4WT9 PDBe: 4WT9 UniProt: Q99IB8

Downloads

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Drug annotations from DrugDomain.