ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pdkA2 - ECOD Domain | ECOD

ECOD/Domains/e4pdkA2

e4pdkA2

UID: 001500814

PDB

Range: A:79-266
PDB: 4PDK chain A(all domains)
UniProt: Q9KQU8 (all domains)
Gene: fadR

Molecule: Fatty acid metabolism regulator protein

3D Structure

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Related Domains

Browse other domains in FadR_C →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFatty acid responsive transcription factor FadR, C-terminal domain(628)

HH-groupFatty acid responsive transcription factor FadR, C-terminal domain(628.1)

TT-groupFatty acid responsive transcription factor FadR, C-terminal domain(628.1.1)

FFamilyFadR_C(628.1.1.2)

Ligands

in contact, ≤ 4 Å

S-{(3R,5R,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14-dioxo-2,4,6-trioxa-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaheptadecan-17-yl} (9Z)-octadec-9-enethioate (non-preferred name)3VV

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

FadR C-terminal domain

ClanCL0388FadR-C

External Links

ECOD PDB View: 4PDK RCSB PDB: 4PDK PDBe: 4PDK UniProt: Q9KQU8

Downloads

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