ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pneB1 - ECOD Domain | ECOD

ECOD/Domains/e4pneB1

e4pneB1

UID: 001500815

PDB

Range: B:9-282
PDB: 4PNE chain B(all domains)
UniProt: Q9ALM7 (all domains)
Gene: spnF

Molecule: Methyltransferase-like protein

3D Structure

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Related Domains

Browse other domains in Methyltransf_11 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_11(2003.1.5.66)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752

+ 1 additive (Malonate Ion)

Malonate IonMLI
DrugBank DB02201

Shown in the structure viewer.

Pfam Families

PF08241Methyltransf_11

Methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4PNE RCSB PDB: 4PNE PDBe: 4PNE UniProt: Q9ALM7

Downloads

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Drug annotations from DrugDomain.