ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4r6pC1 - ECOD Domain | ECOD

ECOD/Domains/e4r6pC1

e4r6pC1

UID: 001500865

PDB

Range: C:1-133
PDB: 4R6P chain C(all domains)
UniProt: P18670 (all domains)

Molecule: Agglutinin alpha chain

3D Structure

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Related Domains

Browse other domains in Jacalin →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-Prism I(76)

HH-groupbeta-Prism I(76.1)

TT-groupbeta-Prism I(76.1.1)

FFamilyJacalin(76.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Isopropyl alcohol, 1,2-ETHANEDIOL)

Isopropyl alcoholIPA
DrugBank DB02325
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01419Jacalin

Jacalin-like lectin domain

ClanCL0568Man_lectin

External Links

ECOD PDB View: 4R6P RCSB PDB: 4R6P PDBe: 4R6P UniProt: P18670

Downloads

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