ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ucxR3 - ECOD Domain | ECOD

ECOD/Domains/e4ucxR3

e4ucxR3

UID: 001500955

PDB

Range: R:5-49,R:508-549
PDB: 4UCX chain R(all domains)
UniProt: P18188 (all domains)
Gene: hydB

Molecule: NICKEL-DEPENDENT HYDROGENASE LARGE SUBUNIT

3D Structure

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Related Domains

Browse other domains in NiFeSe_Hases, HoxH →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4)

TT-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4.1)

FFamilyNiFeSe_Hases, HoxH(244.4.1.3)

Ligands

in contact, ≤ 4 Å

CARBONMONOXIDE-(DICYANO) IRONFCO
Magnesium ionMG
metal
NICKEL (II) IONNI

Pfam Families

PF00374NiFeSe_Hases

Nickel-dependent hydrogenase

HoxL-like

External Links

ECOD PDB View: 4UCX RCSB PDB: 4UCX PDBe: 4UCX UniProt: P18188

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.