ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4x4wA1 - ECOD Domain | ECOD

ECOD/Domains/e4x4wA1

e4x4wA1

UID: 001501290

RepresentativePDB

Range: A:1-153
PDB: 4X4W chain A(all domains)
UniProt: Q96Q11 (all domains)
Gene: TRNT1

Molecule: CCA tRNA nucleotidyltransferase 1, mitochondrial

3D Structure

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Related Domains

Browse other domains in PolyA_pol →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyPolyA_pol(316.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 2 additives (Glycerin, Citrate anion)

GlycerinGOL
DrugBank DB09462
Citrate anionFLC

Shown in the structure viewer.

Pfam Families

PF01743PolyA_pol

Poly A polymerase head domain

ClanCL0260NTP_transf

External Links

ECOD PDB View: 4X4W RCSB PDB: 4X4W PDBe: 4X4W UniProt: Q96Q11

Downloads

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Drug annotations from DrugDomain.