ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3vivA1 - ECOD Domain | ECOD

ECOD/Domains/e3vivA1

e3vivA1

UID: 000150191

PDB

Range: A:19-236
PDB: 3VIV chain A(all domains)
UniProt: O59179 (all domains)
Gene: PH1510

Molecule: 441aa long hypothetical nfeD protein

3D Structure

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Related Domains

Browse other domains in NfeD1b_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupClpP/crotonase(2486)

HH-groupClpP/crotonase(2486.1)

TT-groupClpP/crotonase(2486.1.1)

FFamilyNfeD1b_N(2486.1.1.17)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 2 additives (Glycerin, Imidazole)

GlycerinGOL
DrugBank DB09462
ImidazoleIMD

Pfam Families

PF25145NfeD1b_N

NfeD1b, N-terminal domain

ClanCL0127ClpP_crotonase

External Links

ECOD PDB View: 3VIV RCSB PDB: 3VIV PDBe: 3VIV UniProt: O59179

Downloads

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DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.