ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qrhD1 - ECOD Domain | ECOD

ECOD/Domains/e4qrhD1

e4qrhD1

UID: 001502723

PDB

Range: D:3-200
PDB: 4QRH chain D(all domains)
UniProt: A0A0J9X1Z9 (all domains)
Gene: gmk

Molecule: Guanylate kinase

3D Structure

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Related Domains

Browse other domains in Guanylate_kin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyGuanylate_kin(2004.1.1.50)

Ligands

in contact, ≤ 4 Å

guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate)0O2
Potassium ionK
metal
Magnesium ionMG

Pfam Families

PF00625Guanylate_kin

Guanylate kinase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 4QRH RCSB PDB: 4QRH PDBe: 4QRH UniProt: A0A0J9X1Z9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.