ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qvbA1 - ECOD Domain | ECOD

ECOD/Domains/e4qvbA1

e4qvbA1

UID: 001502732

PDB

Range: A:4-144
PDB: 4QVB chain A(all domains)
UniProt: O06553 (all domains)
Gene: Rv1155

Molecule: Rv1155 protein

3D Structure

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Related Domains

Browse other domains in Putative_PNPOx →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPutative_PNPOx(1.1.5.8)

Ligands

in contact, ≤ 4 Å

Coenzyme F420F42
drugDrugBank DB03913
1,3-PropanediolPDO
drugDrugBank DB02774
(S)-propane-1,2-diol

Pfam Families

PF01243PNPOx_N

Pyridoxamine 5'-phosphate oxidase

ClanCL0336FMN-binding

External Links

ECOD PDB View: 4QVB RCSB PDB: 4QVB PDBe: 4QVB UniProt: O06553

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB04349

+ 2 additives (Formic acid, 1,2-ETHANEDIOL)

Formic acidFMT
DrugBank DB01942
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.