ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4esjA2 - ECOD Domain | ECOD

ECOD/Domains/e4esjA2

e4esjA2

UID: 001503111

RepresentativePDB

Range: A:183-254
PDB: 4ESJ chain A(all domains)
UniProt: P0A460 (all domains)
Gene: dpnC

Molecule: Type-2 restriction enzyme DpnI

3D Structure

Loading viewer...

Related Domains

Browse other domains in DpnI_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyDpnI_C(101.1.2.158)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Dam-replacing HTH domain

ClanCL0123HTH

External Links

ECOD PDB View: 4ESJ RCSB PDB: 4ESJ PDBe: 4ESJ UniProt: P0A460

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure