ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5agaA5 - ECOD Domain | ECOD

ECOD/Domains/e5agaA5

e5agaA5

UID: 001503136

RepresentativePDB

Range: A:790-891
PDB: 5AGA chain A(all domains)
UniProt: O75417 (all domains)
Gene: POLQ

Molecule: DNA POLYMERASE THETA

3D Structure

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Related Domains

Browse other domains in DUF7898 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM-like subdomain in Sec63-like proteins(102.5)

TT-groupSAM-like subdomain in Sec63-like proteins(102.5.1)

FFamilyDUF7898(102.5.1.9)

Ligands

in contact, ≤ 4 Å

Potassium ionK
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF25453DUF7898

Domain of unknown function (DUF7898)

ClanCL0198HHH

External Links

ECOD PDB View: 5AGA RCSB PDB: 5AGA PDBe: 5AGA UniProt: O75417

Downloads

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