ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4r8zA1 - ECOD Domain | ECOD

ECOD/Domains/e4r8zA1

e4r8zA1

UID: 001503459

PDB

Range: A:151-368
PDB: 4R8Z chain A(all domains)
UniProt: Q9HV27 (all domains)
Gene: PA4781

Molecule: Cyclic di-GMP phosphodiesterase

3D Structure

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Related Domains

Browse other domains in HD_5 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupPDEase-like(131)

HH-groupHD-domain/PDEase-like(131.1)

TT-groupHD-domain/PDEase-like(131.1.1)

FFamilyHD_5(131.1.1.13)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
NICKEL (II) IONNI
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

HD domain

ClanCL0237HD_PDEase

External Links

ECOD PDB View: 4R8Z RCSB PDB: 4R8Z PDBe: 4R8Z UniProt: Q9HV27

Downloads

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