ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4wvbB1 - ECOD Domain | ECOD

ECOD/Domains/e4wvbB1

e4wvbB1

UID: 001503956

RepresentativePDB

Range: B:2-420
PDB: 4WVB chain B(all domains)
UniProt: Q5SJN0 (all domains)
Gene: TTHA0978

Molecule: Uncharacterized protein

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_63, MGH1-like_GH →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyGlyco_hydro_63, MGH1-like_GH(109.2.1.64)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03200Glyco_hydro_63

Glycosyl hydrolase family 63 C-terminal domain

ClanCL00596_Hairpin

PF22422MGH1-like_GH

Mannosylglycerate hydrolase MGH1-like glycoside hydrolase domain

ClanCL00596_Hairpin

External Links

ECOD PDB View: 4WVB RCSB PDB: 4WVB PDBe: 4WVB UniProt: Q5SJN0

Downloads

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