ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4b63A1 - ECOD Domain | ECOD

ECOD/Domains/e4b63A1

e4b63A1

UID: 001504325

PDB

Range: A:29-215,A:407-491
PDB: 4B63 chain A(all domains)
UniProt: E9QYP0 (all domains)
Gene: sidA

Molecule: L-ORNITHINE N5 MONOOXYGENASE

3D Structure

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Related Domains

Browse other domains in Lys_Orn_oxgnase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNucleotide-binding domain(2003.1.3)

FFamilyLys_Orn_oxgnase(2003.1.3.4)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461

Pfam Families

PF13434Lys_Orn_oxgnase

L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4B63 RCSB PDB: 4B63 PDBe: 4B63 UniProt: E9QYP0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

OrnithineORN

drugDrugBank DB00129

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.