ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3b89A1 - ECOD Domain | ECOD

ECOD/Domains/e3b89A1

e3b89A1

UID: 001504350

PDB

Range: A:55-250
PDB: 3B89 chain A(all domains)
UniProt: Q763K9 (all domains)
Gene: rmtB

Molecule: 16S rRNA methylase

3D Structure

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Related Domains

Browse other domains in FmrO →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyFmrO(2003.1.5.60)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-Monophosphate5GP
drugDrugBank DB01972

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Ribosomal RNA methyltransferase (FmrO)

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3B89 RCSB PDB: 3B89 PDBe: 3B89 UniProt: Q763K9

Downloads

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