ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4xdaB1 - ECOD Domain | ECOD

ECOD/Domains/e4xdaB1

e4xdaB1

UID: 001507835

PDB

Range: B:1-306
PDB: 4XDA chain B(all domains)
UniProt: A5F1B7 (all domains)

Molecule: Ribokinase

3D Structure

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Related Domains

Browse other domains in PfkB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRibokinase-like(2003.6)

TT-groupRibokinase-like(2003.6.1)

FFamilyPfkB(2003.6.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Sodium ionNA
metal
alpha-D-ribofuranoseRIB

Pfam Families

pfkB family carbohydrate kinase

ClanCL0118Ribokinase

External Links

ECOD PDB View: 4XDA RCSB PDB: 4XDA PDBe: 4XDA UniProt: A5F1B7

Downloads

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within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.