ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4yciA1 - ECOD Domain | ECOD

ECOD/Domains/e4yciA1

e4yciA1

UID: 001507869

PDB

Range: A:60-256
PDB: 4YCI chain A(all domains)
UniProt: Q9WV56 (all domains)
Gene: Gdf2

Molecule: Bone Morphogenetic Protein 9 Growth Factor Domain

3D Structure

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Related Domains

Browse other domains in TGFb_propeptide →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyTGFb_propeptide(10.2.1.5)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00688TGFb_propeptide

TGF-beta propeptide

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 4YCI RCSB PDB: 4YCI PDBe: 4YCI UniProt: Q9WV56

Downloads

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